Source code for swh.lister.conda
# Copyright (C) 2022 The Software Heritage developers
# See the AUTHORS file at the top-level directory of this distribution
# License: GNU General Public License version 3, or any later version
# See top-level LICENSE file for more information
"""
Conda lister
============
Anaconda is a package manager that provides tooling for datascience.
The Conda lister list `packages`_ from Anaconda `repositories`_.
Those repositories host packages for several languages (Python, R) operating systems
and architecture.
Packages are grouped within free or commercial `channels`_.
To instantiate a conda lister we need to give some `channel`and `arch` arguments::
lister = CondaLister(
scheduler=swh_scheduler, channel="free", archs=["linux-64", "osx-64", "win-64"]
)
The default `url` value of lister is `https://repo.anaconda.com/pkgs`. One can set another
repository url, for example::
lister = CondaLister(
scheduler=swh_scheduler,
url="https://conda.anaconda.org",
channel="conda-forge",
archs=["linux-64"],
)
Origins retrieving strategy
---------------------------
Each channel provides several `repodata.json`_ files that list available packages
and related versions.
Given a channel and a list of system and architecture the lister download and parse
corresponding repodata.json.
We use bz2 compressed version of repodata.json. See for example `main/linux-64`_ page
to view available repodata files.
Page listing
------------
The lister returns one page per channel / architecture that list all available package
versions.
Origins from page
-----------------
Origins urls are built following this pattern `https://anaconda.org/{channel}/{pkgname}`.
Each origin is yield with an `artifacts` entry in `extra_loader_arguments` that list
artifact metadata for each archived package version.
Origin data example for one origin with two related versions.::
{
"url": "https://anaconda.org/conda-forge/lifetimes",
"artifacts": {
"linux-64/0.11.1-py36h9f0ad1d_1": {
"url": "https://conda.anaconda.org/conda-forge/linux-64/lifetimes-0.11.1-py36h9f0ad1d_1.tar.bz2", # noqa: B950
"date": "2020-07-06T12:19:36.425000+00:00",
"version": "0.11.1",
"filename": "lifetimes-0.11.1-py36h9f0ad1d_1.tar.bz2",
"checksums": {
"md5": "faa398f7ba0d60ce44aa6eeded490cee",
"sha256": "f82a352dfae8abceeeaa538b220fd9c5e4aa4e59092a6a6cea70b9ec0581ea03", # noqa: B950
},
},
"linux-64/0.11.1-py36hc560c46_1": {
"url": "https://conda.anaconda.org/conda-forge/linux-64/lifetimes-0.11.1-py36hc560c46_1.tar.bz2", # noqa: B950
"date": "2020-07-06T12:19:37.032000+00:00",
"version": "0.11.1",
"filename": "lifetimes-0.11.1-py36hc560c46_1.tar.bz2",
"checksums": {
"md5": "c53a689a4c5948e84211bdfc23e3fe68",
"sha256": "76146c2ebd6e3b65928bde53a2585287759d77beba785c0eeb889ee565c0035d", # noqa: B950
},
},
},
}
Running tests
-------------
Activate the virtualenv and run from within swh-lister directory::
pytest -s -vv --log-cli-level=DEBUG swh/lister/conda/tests
Testing with Docker
-------------------
Change directory to swh/docker then launch the docker environment::
docker compose up -d
Then schedule a conda listing task::
docker compose exec swh-scheduler swh scheduler task add -p oneshot list-conda channel="free" archs="[linux-64, osx-64, win-64]" # noqa: B950
You can follow lister execution by displaying logs of swh-lister service::
docker compose logs -f swh-lister
.. _packages: https://docs.anaconda.com/anaconda/packages/pkg-docs/
.. _Anaconda: https://anaconda.com/
.. _repositories: https://repo.anaconda.com/pkgs/
.. _channels: https://docs.anaconda.com/anaconda/user-guide/tasks/using-repositories/
.. _main/linux-64: https://repo.anaconda.com/pkgs/main/linux-64/
.. _repodata.json: https://repo.anaconda.com/pkgs/free/linux-64/repodata.json
"""
[docs]
def register():
from .lister import CondaLister
return {
"lister": CondaLister,
"task_modules": ["%s.tasks" % __name__],
}