Source code for swh.web.utils.citation

# Copyright (C) 2024  The Software Heritage developers
# See the AUTHORS file at the top-level directory of this distribution
# License: GNU Affero General Public License version 3, or any later version
# See top-level LICENSE file for more information

from typing import Any, Dict, List, Optional

import yaml

from swh.indexer.bibtex import cff_to_bibtex, codemeta_to_bibtex
from swh.model.hashutil import hash_to_bytes
from swh.model.swhids import CoreSWHID, ObjectType, QualifiedSWHID
from swh.web.browse.snapshot_context import get_snapshot_context
from swh.web.utils.archive import (
    lookup_intrinsic_citation_metadata_by_target_swhid,
    lookup_origin_intrinsic_citation_metadata,
    lookup_snapshot,
    lookup_snapshot_alias,
)
from swh.web.utils.identifiers import get_swhids_info
from swh.web.utils.typing import (
    Citation,
    IntrinsicMetadataFile,
    IntrinsicMetadataFiletype,
    SWHObjectInfo,
)


def _get_bibtex_from_intrinsic_citation_metadata(
    raw_intrinsic_metadata: List[IntrinsicMetadataFile],
    swhid: Optional[QualifiedSWHID] = None,
) -> Citation:

    # Should not happen: metadata contains at least one of codemeta.json or citation.cff
    assert len(raw_intrinsic_metadata) > 0, (
        f"lookup_origin_raw_intrinsic_metadata returned neither codemeta.json "
        f"nor citation.cff: {raw_intrinsic_metadata}"
    )

    metadata_file = raw_intrinsic_metadata[0]
    metadata_file_origin_type = metadata_file["type"]
    metadata_file_id = metadata_file["id"]

    source_swhid_params: Dict[str, Any] = {
        "object_type": ObjectType.CONTENT,
        "object_id": hash_to_bytes(metadata_file_id),
    }
    if swhid is not None:
        if swhid.origin:
            source_swhid_params["origin"] = swhid.origin
        if swhid.visit:
            source_swhid_params["visit"] = swhid.visit
        if swhid.anchor:
            source_swhid_params["anchor"] = swhid.anchor
        elif swhid.object_type in (ObjectType.RELEASE, ObjectType.REVISION):
            source_swhid_params["anchor"] = CoreSWHID(
                object_type=swhid.object_type, object_id=swhid.object_id
            )
        elif swhid.object_type == ObjectType.SNAPSHOT:
            source_swhid_params["visit"] = str(
                CoreSWHID(object_type=ObjectType.SNAPSHOT, object_id=swhid.object_id)
            )
            snapshot = lookup_snapshot(
                swhid.object_id.hex(), branches_from="HEAD", branches_count=1
            )
            if "HEAD" in snapshot["branches"]:
                branch_target = snapshot["branches"]["HEAD"]["target"]
                branch_target_type = snapshot["branches"]["HEAD"]["target_type"]
                if branch_target_type == "alias":
                    branch = lookup_snapshot_alias(swhid.object_id.hex(), "HEAD")
                    if branch:
                        branch_target = branch["target"]
                        branch_target_type = branch["target_type"]
                source_swhid_params["anchor"] = str(
                    CoreSWHID(
                        object_type=ObjectType[branch_target_type.upper()],
                        object_id=hash_to_bytes(branch_target),
                    )
                )
        source_swhid_params["path"] = "/" + metadata_file["name"]

    citation = Citation(
        format="bibtex",
        content="",
        source_swhid=str(QualifiedSWHID(**source_swhid_params)),
    )

    if metadata_file_origin_type == IntrinsicMetadataFiletype.CODEMETA.value:
        citation["content"] = codemeta_to_bibtex(metadata_file["content"], swhid)
    elif metadata_file_origin_type == IntrinsicMetadataFiletype.CFF.value:
        citation["content"] = cff_to_bibtex(
            yaml.dump(metadata_file["content"], default_flow_style=False), swhid
        )
    return citation


[docs] def get_bibtex_from_origin( origin_url: str, ) -> Citation: """ Get citation in BibTeX format given a software origin, from found intrinsic citation metadata in the repository, i.e. original codemeta.json and citation.cff, for the latest visit snapshot main branch root directory. Args: origin_url: origin url Returns: the software citation in BibTeX format Raises: swh.web.utils.exc.NotFoundExc: when snapshot, branch or directory is missing, no metadata could be found or the metadata files could not be decoded BadInputExc: when the origin does not allow to find metadata """ metadata = lookup_origin_intrinsic_citation_metadata(origin_url) # compute a target SWHID from latest origin snapshot target_object_info = None target_swhid = None snapshot_context = get_snapshot_context(origin_url=origin_url) if snapshot_context["revision_id"] is not None: target_object_info = SWHObjectInfo( object_type=ObjectType.REVISION, object_id=snapshot_context["revision_id"], ) elif snapshot_context["release_id"] is not None: target_object_info = SWHObjectInfo( object_type=ObjectType.RELEASE, object_id=snapshot_context["release_id"], ) elif snapshot_context["root_directory"] is not None: target_object_info = SWHObjectInfo( object_type=ObjectType.DIRECTORY, object_id=snapshot_context["root_directory"], ) if target_object_info: swhids_info = get_swhids_info( [target_object_info], snapshot_context=snapshot_context ) swhid_with_context = swhids_info[0]["swhid_with_context"] if swhid_with_context: target_swhid = QualifiedSWHID.from_string(swhid_with_context) return _get_bibtex_from_intrinsic_citation_metadata(metadata, target_swhid)
[docs] def get_bibtex_from_swhid( target_swhid: str, ) -> Citation: """ Get citation in BibTeX format given a SWHID, from found intrinsic citation metadata in the repository, i.e. original codemeta.json and citation.cff, for the target object. Args: target_swhid: SWHID which can be qualified or not, if the target object is of type Content, it must be qualified with an anchor Returns: the software citation in BibTeX format Raises: swh.web.utils.exc.NotFoundExc: when snapshot, branch or directory is missing, no metadata could be found or the metadata files could not be decoded BadInputExc: when the origin does not allow to find metadata """ metadata = lookup_intrinsic_citation_metadata_by_target_swhid(target_swhid) parsed_swhid = QualifiedSWHID.from_string(target_swhid) return _get_bibtex_from_intrinsic_citation_metadata(metadata, parsed_swhid)